Insertion junction: CLIP2.056242_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056242
Chromosome:chromosome 6
Location:7270750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298950 (1 of 2) PF10343 - Potential Queuosine, Q, salvage protein family (Q_salvage) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACCTCCCCTTGGCATCCGGCCAACTTCCCTTCTTAGCAGGGGATCCCA
Internal bar code:ATGATAGCTCGAATGATCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1770
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTAATGGGGCACAGGGA
Suggested primer 2:GCAACCGGTCTGTGAAAACC