Insertion junction: CLIP2.056247_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056247
Chromosome:chromosome 4
Location:4079379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g233302 (1 of 2) PTHR23132//PTHR23132:SF9 - D-ALANINE--D-ALANINE LIGASE // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGACCAGAAACCACGCAGTTCGCGGCTGTGTGGTTCGGTAAAGTGCGG
Internal bar code:ACTATGGGGTGTGATACCGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3324
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:115
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:ATACTTGGGCGCCGTGATAG
Suggested primer 2:TATCCAACCCGCCTAGACCA