Insertion junction: CLIP2.056250_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056250
Chromosome:chromosome 16
Location:607309
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692100 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAAATGGCGGCGTGTATAGCAAGGGCGTGCAGTGCGAGGTCGTGCGC
Internal bar code:CAGCTTTGTGAGGCTTAGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1219
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCAGCTTGCAAAAGTCTG
Suggested primer 2:ATGGAAAGAGCAAGAGCCCC