Insertion junction: CLIP2.056255_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056255
Chromosome:chromosome 10
Location:6681829
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g466450 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGCGTTTGCGCGCGGGCGCGCGCGGGCGCGGGTGCCGCCGCCGCCTC
Internal bar code:TATACCCGTATTTCAGGCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:726
LEAP-Seq percent confirming:98.8095
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCTGAATGGGGGTGGAG
Suggested primer 2:GCATGTACGTTGCAGTCGAC