Insertion junction: CLIP2.056261_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056261
Chromosome:chromosome 12
Location:2685354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505150 OPR52 (1 of 781) IPR000104 - Antifreeze protein, type I; OctotricoPeptide Repeat protein 52 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCCTGGACAATTTCGTCTAAATTCTCAGCGCACGAGAACCGAACCA
Internal bar code:CGGTCAGTATACCCATAGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1491
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGCTTACGGAAGGTGTC
Suggested primer 2:CTGATGAGCTGGCTCGGTAG