Insertion junction: CLIP2.056261_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056261
Chromosome:chromosome 12
Location:2685357
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505150 OPR52 (1 of 781) IPR000104 - Antifreeze protein, type I; OctotricoPeptide Repeat protein 52 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGGCGGTGCGCCGCTGCCGACATAGTGCTGAATTGTTTCAAGCTTCG
Internal bar code:CGGTCAGTATACCCATAGAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1591
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATGAGCTGGCTCGGTAG
Suggested primer 2:TGGTGCTTACGGAAGGTGTC