Insertion junction: CLIP2.056273_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056273
Chromosome:chromosome 5
Location:2294785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238150 (1 of 1) PF07646 - Kelch motif (Kelch_2) 3'UTR
Cre05.g238200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCAGACCAACCAGCATGAATGACCGCCAGTCCAACCTAACTCAGATC
Internal bar code:AAACCCGATGGTTAAGAAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:586
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGTGTTTTGGGGGA
Suggested primer 2:GATTCTGGCTGGTGCTGACT