Insertion junction: CLIP2.056273_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056273
Chromosome:chromosome 5
Location:2294792
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238150 (1 of 1) PF07646 - Kelch motif (Kelch_2) 3'UTR
Cre05.g238200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAGAAAGAGCTTGTCTTGCGGGGTTGCTGACTTGACGTTAACAGCTG
Internal bar code:AAACCCGATGGTTAAGAAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1292
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GATTCTGGCTGGTGCTGACT
Suggested primer 2:TGTGTGTGTGTTTTGGGGGA