Insertion junction: CLIP2.056279_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056279
Chromosome:chromosome 7
Location:6209684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g800869 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGAAGGGACATGTGCGCCGTTACCGTCAATTGTCCATGGACGCGCGA
Internal bar code:TTTTTATAGATGCTTCTCAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:863
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATGCCTACGCTTGAATG
Suggested primer 2:GGGAATGGAAGGGAAAGGCA