Insertion junction: CLIP2.056286_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056286
Chromosome:chromosome 16
Location:6483335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674850 (1 of 1) PTHR14625//PTHR14625:SF3 - MICROCEPHALIN // MICROCEPHALIN 3'UTR
Cre16.g674900 (1 of 55) PTHR23257//PTHR23257:SF394 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGGCGGTGCGCCCGGCAGCAGCGCTGCCGCACAGGCAGCTGCGAGCG
Internal bar code:GGTGGCCCCGATGAAGTAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2919
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGCGACATCTGAGCAGG
Suggested primer 2:CATCAGTGGGAGCATGGGTT