Insertion junction: CLIP2.056293_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056293
Chromosome:chromosome 3
Location:269421
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144364 (1 of 4) IPR000225//IPR011989//IPR016024 - Armadillo // Armadillo-like helical // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTGATCGTGGGCCGCAGCGCAGAAGGGGCAGCGGCACTAAATGGGTTC
Internal bar code:GGAGAAGTGGCTTGGGTCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2512
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATTTGGCATCAGTGGGG
Suggested primer 2:CGCACACAATAGACATGCCG