Insertion junction: CLIP2.056302_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056302
Chromosome:chromosome 16
Location:5425377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGACAGGGTAAGGAGCAGGGTTGCGTAGCCGGAAGCCCGCATAATGT
Internal bar code:AACCAGGCATGTCGAGGGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2891
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CCATGAAGGTGCCTGGTGAT
Suggested primer 2:GAAGGTGTTCGACTGCCTCA