Insertion junction: CLIP2.056306_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056306
Chromosome:chromosome 15
Location:1230976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801722 NCL62 Nuclear Control of chloroplast-Like 62; (1 of 39) PF08373 - RAP domain (RAP) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGCCGCAAATGCTGGCAGCAGAGGCGTTTGGCACCAGATAGCCCTCC
Internal bar code:CGGTGCTGGATAGCGGTGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1449
LEAP-Seq percent confirming:84.7458
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCCACTCCGTAGTCAAA
Suggested primer 2:AGCAGGATGTTGGACAGCTC