Insertion junction: CLIP2.056311_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056311
Chromosome:chromosome 6
Location:7340850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g299800 LCL1 Long-chain-fatty-acid-CoA ligase; (1 of 1) 6.2.1.20 - Long-chain-fatty-acid--[acyl-carrier-protein] ligase / Acyl-[acyl-carrier-protein] synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTATGGAACGTACTTGGCCTCGGCGCCTTGCCGTGTGCTCGTCTTGTA
Internal bar code:GGGGAAAAGGACGTCCAGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1729
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCGTGGGTACAACCATA
Suggested primer 2:CGACTACCACCCCTTTGACC