Insertion junction: CLIP2.056312_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056312
Chromosome:chromosome 11
Location:2156626
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467739 IFT54,Traf3ip1,FAP116,Dyf-11Elipsa Intraflagellar Transport Protein 54; (1 of 1) PTHR31363:SF0 - TRAF3-INTERACTING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTACATACACGCCATCACGGTGCGCCCGTGGGGATGCACTCTGCACCT
Internal bar code:AATCAAAGAACTATGTCGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3489
LEAP-Seq percent confirming:89.2405
LEAP-Seq n confirming:141
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:158

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCTGTCGACCCAAGCTCA
Suggested primer 2:CGCATCATTGGCATGAAGGG