Insertion junction: CLIP2.056323_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056323
Chromosome:chromosome 8
Location:3837957
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g381550 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGCATTCCCCAGACGCCGTCGTCCCATTCCCCCGAACCCCGTCCATC
Internal bar code:ATGTCTCTTGTAATTGTGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:158
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTACTGCCACATACGCA
Suggested primer 2:TACTACCCCGCCAACCAGTA