Insertion junction: CLIP2.056330_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056330
Chromosome:chromosome 5
Location:1366445
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234636 PFLAE,PFA1,PFLA1 Pyruvate formate lyase activating enzyme 1; (1 of 1) 1.97.1.4 - [Formate-C-acetyltransferase]-activating enzyme / S-adenosyl-L-methionine-cleaving) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGGCGACTGCGGCCACACCTCGTGACCTGTGACCCCAGCTGAAGTC
Internal bar code:CATGTTTGATGTGCGTTTGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1381
LEAP-Seq percent confirming:95.4023
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTTTGGCCTCTCGTGAT
Suggested primer 2:AGAGGACTCGAGCTAGGGTG