Insertion junction: CLIP2.056336_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056336
Chromosome:chromosome 10
Location:171758
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g418900 (1 of 18) K13412 - calcium-dependent protein kinase (CPK) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGTTGCCAACGCTATTGACATTGTACTTGAAGATGCAAGACGTTCGAG
Internal bar code:CTACGCTGGACGCTAATGGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2693
LEAP-Seq percent confirming:97.0803
LEAP-Seq n confirming:133
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:137

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACAGTGCACCATAGCGT
Suggested primer 2:ATCAGGACATGCTGATGGCG