Insertion junction: CLIP2.056337_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056337
Chromosome:chromosome 3
Location:8585212
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g800406 (1 of 21) IPR001584//IPR012337 - Integrase, catalytic core // Ribonuclease H-like domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACTTGCACGATGGGTAGCGGGTGCAGGGGCTGGTGTCGCACAAGCACG
Internal bar code:CTCCTTCGAGCATCAGCATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:2469
LEAP-Seq percent confirming:1.2987
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:76
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCAGTACCGGAGTTTCGT
Suggested primer 2:CCTTCTCCCTCTGAGTCCCA