Insertion junction: CLIP2.056343_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056343
Chromosome:chromosome 14
Location:144822
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre14.g608452 (1 of 1) K11366 - ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] (USP22_27_51, UBP8) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAAGTAGTCTGGAGTAGTAGTGGTGATAAGTAAGGCTCGTTGGTAAAG
Internal bar code:AATGTTTTCATCCGAATTCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3030
LEAP-Seq percent confirming:28.8136
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTCCTCGAAGTCAGCCAA
Suggested primer 2:TCATCCCCCAATGCTGGAAC