Insertion junction: CLIP2.056351_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056351
Chromosome:chromosome 16
Location:1157364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g650250 HFO39,HFO25 (1 of 33) K11254 - histone H4 (H4); Histone H4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACTCCCAGAATCTGAGCTTCCGGCATCTTCTACACCCGCCTATCCAG
Internal bar code:ATACGGCAAGTAGTTCAGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1733
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGGCTGGAATGTGGTTTG
Suggested primer 2:GACTCACACGCCCACTACAA