Insertion junction: CLIP2.056360_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056360
Chromosome:chromosome 5
Location:3607608
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234350 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGAAATAGCAATGCTGGAGCGAATTTCCTCGCAGGGCTCCGAACATGT
Internal bar code:TTAAGATGTCGGGACATTCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1549
LEAP-Seq percent confirming:91.1111
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGTCCTTGGGCTTGTAG
Suggested primer 2:GCGGTGCTTGGTTCAAACAT