Insertion junction: CLIP2.056360_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056360
Chromosome:chromosome 5
Location:3607609
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234350 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTCCAATGCTCTCTTCCGTTCGCAGCAGGCCCTCGTGAGGCCTAGGG
Internal bar code:TTAAGATGTCGGGACATTCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3477
LEAP-Seq percent confirming:87.9747
LEAP-Seq n confirming:139
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:158

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTGCTTGGTTCAAACAT
Suggested primer 2:TGCAGTCCTTGGGCTTGTAG