Insertion junction: CLIP2.056362_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056362
Chromosome:chromosome 12
Location:3730179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514100 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTCACTCGGGCCATAGCCATAACATGCTCATCAGGCCGGGGCCAGGG
Internal bar code:TAATTAACATTAACTACTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:ACTCAGTCATTGACGTGCGT
Suggested primer 2:AGCAGGTGTTGAGCCTCATC