Insertion junction: CLIP2.056365_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056365
Chromosome:chromosome 3
Location:4167237
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800327 (1 of 3) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTACTTTCGGGATATGGCATTGCAAGGACGGGACCGCCCTGGATGAGC
Internal bar code:CAAAAGGGTCTTGTTTGTCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAACGCAAAGCCTCGACA
Suggested primer 2:CCGTACCGGTAGTGTGATCG