Insertion junction: CLIP2.056365_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056365
Chromosome:chromosome 10
Location:5448395
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457450 (1 of 1) PTHR31400:SF1 - PROTEIN GUCD1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAACCCTACGGATGTGTACAGACCCAACTGGCCACGTTTTCAATTTG
Internal bar code:TAGGTTTCTGAAAGGATTATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGTGTTGTCAGCTGAGTC
Suggested primer 2:GAGCACGACAAGACTGACCA