Insertion junction: CLIP2.056366_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056366
Chromosome:chromosome 16
Location:792157
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690700 (1 of 13) IPR000086//IPR015797 - NUDIX hydrolase domain // NUDIX hydrolase domain-like 3'UTR
Cre16.g690750 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGTTGGCGACTCCGACCCCGACATGCTTGTTGTACTTCCGCCGTGTCA
Internal bar code:AGGGATGCGGTGGATCGAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGGAAGAGGACGAGGAG
Suggested primer 2:ACCCCACCCCATTTGTGTTT