Insertion junction: CLIP2.056372_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056372
Chromosome:chromosome 16
Location:5753886
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680500 EFH10 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair; EF-hand Calcium binding protein, may be centrin-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCACCACAGCACCTATCCCCCTGTCCTATCCATACGCCAGCATACCA
Internal bar code:TACCGGGTGGACTTGGCCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3109
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGATGTGGCAATGGAGCA
Suggested primer 2:ACCAAATGGCTCCCATCCTG