Insertion junction: CLIP2.056372_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056372
Chromosome:chromosome 16
Location:5753889
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680500 EFH10 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair; EF-hand Calcium binding protein, may be centrin-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTCACTACTAGCCATCGGACGGCGGAGACGCGGGCATACGCGGAGAA
Internal bar code:TACCGGGTGGACTTGGCCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2138
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAAATGGCTCCCATCCTG
Suggested primer 2:ACTGATGTGGCAATGGAGCA