Insertion junction: CLIP2.056373_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056373
Chromosome:chromosome 6
Location:2941970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273350 NAT17 N-acetyltransferase; (1 of 71) IPR016181 - Acyl-CoA N-acyltransferase 3'UTR
Cre06.g273400 TMC2 putative tRNA (cytosine-5)-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTCCACCGTCTGACTGCGTCTGTCTCTGAGTATACCTATGACTGCAGT
Internal bar code:GGGGTGAGCGTGGGGCCGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2412
LEAP-Seq percent confirming:56.5657
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGGAGTGTCCCTATGGG
Suggested primer 2:GCTCCTCTAATCCTGGTCGC