Insertion junction: CLIP2.056375_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056375
Chromosome:chromosome 6
Location:337246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g251200 IFT43,MOT41 (1 of 1) PTHR33724//PTHR33724:SF1 - FAMILY NOT NAMED // INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG; Intraflagellar transport protein 43 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTGCTGCATATCGGCACTGAGCCGGTGAACGAGTTCGCGGCCGTGCG
Internal bar code:AATCAAGTGAGGAGGGGTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2174
LEAP-Seq percent confirming:90.7895
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTAGACCGAAGCCACCCT
Suggested primer 2:AAGTAGGTTGCAACGGAGGG