Insertion junction: CLIP2.056375_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056375
Chromosome:chromosome 6
Location:337247
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g251200 IFT43,MOT41 (1 of 1) PTHR33724//PTHR33724:SF1 - FAMILY NOT NAMED // INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG; Intraflagellar transport protein 43 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATAAAGAGGCGCTAATGTGAAACGGCTTGTAAGTATGGCATTATCGA
Internal bar code:TTTTTCAGGCATGTTTCTAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2040
LEAP-Seq percent confirming:49.2063
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTAGGTTGCAACGGAGGG
Suggested primer 2:ATCTAGACCGAAGCCACCCT