Insertion junction: CLIP2.056383_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056383
Chromosome:chromosome 6
Location:3283072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g277300 (1 of 4) PTHR22849//PTHR22849:SF39 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCTGGGTCAAGATGGTTATCCTAACAACAACAACAAGTCAAAGCAAA
Internal bar code:GCGGCTCCTTGAATGAATTACC

Confirmation - LEAP-Seq

LEAP-Seq distance:837
LEAP-Seq percent confirming:94.8718
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGGTTGGTAGTTGTGTA
Suggested primer 2:GCTACGTACCGTACTGCTCC