Insertion junction: CLIP2.056384_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056384
Chromosome:chromosome 17
Location:1195512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704650 3'UTR
Cre17.g704700 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCAGGCAGCCGGCAGTCAGACAGCCGGCAGTCAGTCAGTCAATCATT
Internal bar code:CAATGGGTGACAGTTACGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1132
LEAP-Seq percent confirming:72.2222
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGTGGCCTCGTTCACTG
Suggested primer 2:AGACACAAGTACCAGGCGTG