Insertion junction: CLIP2.056384_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056384
Chromosome:chromosome 17
Location:1195621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704650 3'UTR
Cre17.g704700 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCATGGTGGATAGAATGGTGACTATCGAGACTGGAAGCGAACTCGTCG
Internal bar code:CAATGGGTGACAGTTACGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4258
LEAP-Seq percent confirming:93.8775
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:AGACACAAGTACCAGGCGTG
Suggested primer 2:TGATGTGGCCTCGTTCACTG