Insertion junction: CLIP2.056386_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056386
Chromosome:chromosome 1
Location:4238523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g028650 (1 of 726) IPR011009 - Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGCGACAGAAGAAGTGGGGCATGGGGTTTTTGCAGAGCCATTGAAAC
Internal bar code:GGTCGGGGAAGATGGCTCCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1007
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCAAACGGACGGTAACC
Suggested primer 2:TGCTGTGTGGCTGTAGACTG