Insertion junction: CLIP2.056390_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056390
Chromosome:chromosome 6
Location:2959409
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g273550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGAACAGAACCTGCTTGGACTTCCTGACGCAACCTTCTCCCACGGCTT
Internal bar code:AGCGAGGATGCAGTTTTGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2413
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGTAAATGGCTGGCCCC
Suggested primer 2:CTCTACAGCTGGCGAGGATG