Insertion junction: CLIP2.056392_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056392
Chromosome:chromosome 16
Location:5377349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683200 3'UTR
Cre16.g683250 (1 of 1) PF05832 - Eukaryotic protein of unknown function (DUF846) (DUF846) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACGCAAGACACGGTGTGGTGATACGTAGTCACAGGACTGTCACCTAG
Internal bar code:GGCATAGAAGGGGAGGTAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:785
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATTAACAGTCAGGCCCT
Suggested primer 2:ATTGACGCAGACATGGTGGT