Insertion junction: CLIP2.056394_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056394
Chromosome:chromosome 4
Location:2348589
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g221050 (1 of 3) PTHR12136//PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR // STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGAGGCCCGCGAGGGTTGTGATGGATATCTAGAACTGTACCGTGCGC
Internal bar code:CCAATGGACCCTTAGTTTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1086
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCTTGTTGTCCTCCTCG
Suggested primer 2:GGAAAAGCTACATCCCCGCT