Insertion junction: CLIP2.056398_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056398
Chromosome:chromosome 16
Location:5232644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684400 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGGGAACATGGGCAGGGAGCTTCGTGACGTGGGGCCGAGTGAAGGA
Internal bar code:AGCATTTGCATGAAAAATCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1309
LEAP-Seq percent confirming:86.9565
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCACTGCAATATGGGC
Suggested primer 2:GCTGAAAGGAACCTTGCTGC