Insertion junction: CLIP2.056400_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056400
Chromosome:chromosome 14
Location:194734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g801597 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCATGCCTGTACGAACCAACCCCGGCGATGTCCGGGAGATGAGGCAG
Internal bar code:TTGATGTCGTTTAGATCTCTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:252
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACACCAGATGGAAAGGA
Suggested primer 2:GACTGCATACGTGGCGGATA