Insertion junction: CLIP2.056401_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056401
Chromosome:chromosome 10
Location:1352075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g427700 HEL47 (1 of 1) PTHR24031:SF235 - DEAD-BOX ATP-DEPENDENT RNA HELICASE 37-RELATED; DEAD box ATP-dependent RNA helicase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGGATATGATAATGGGCTATCGGACGAATGAATGGCACTACATTCCC
Internal bar code:GCTTACGTGCTCTAGAATAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1405
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCGACAGCGCAAAAGAA
Suggested primer 2:CGTCTGAACGTAATGCTGCG