Insertion junction: CLIP2.056402_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056402
Chromosome:chromosome 12
Location:1633423
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g801368 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAAATGCAACAGCCCCCGCCTCTCCTCGCCAGCCGCTCACAGCCGAA
Internal bar code:TCTATTAAATTTACTACCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2183
LEAP-Seq percent confirming:34.0426
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AGACAAGTGTAGTGGGCACG
Suggested primer 2:GTGAAGGAATGGACGCCTGA