Insertion junction: CLIP2.056403_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.056403
Chromosome:chromosome 3
Location:9012894
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203345 (1 of 21) IPR001357 - BRCT domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAAGCGCAGCAATGTCTATCATTCCTTTATATGTAGAAGAGGCTGCC
Internal bar code:AACTGAGGTTTCTTTGCACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4014
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGAAGGGTTTGGGTATG
Suggested primer 2:GTCCAGGATCTACGAGCAGC