Insertion junction: CLIP2.056412_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056412
Chromosome:chromosome 12
Location:4859398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g523650 HLM19 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase; Histone-lysine N-methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTAGCCCGACGATGTTCTTTAGCTTGGCAGCTGCAAAGCGCACATGG
Internal bar code:GGCGTCTTTATTGCTTTCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1410
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCCGGGATTGGATATCC
Suggested primer 2:CCTGTGTAAAAGGGACGGCT