Insertion junction: CLIP2.056415_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056415
Chromosome:chromosome 13
Location:3112008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g584650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCCCGGCTGCTGCAGAAACACGTGCTCCTCACTGCGACGGCGTACGT
Internal bar code:TTCCCCAATAAACACTGTCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:197
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTCTCCCTCCTTCCTCT
Suggested primer 2:ACCTCCTTGTTGCCCATAGC