Insertion junction: CLIP2.056422_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056422
Chromosome:chromosome 12
Location:7870482
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g553600 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGATGATAGCGATCGTACCGACGTGCCGACGTGCCGGCAGGCCGCGGA
Internal bar code:CCAGGGAGACCAGTAACATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:873
LEAP-Seq percent confirming:75.6098
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTCGTTTTCGTTGGTTT
Suggested primer 2:AGAGGCGCAAGGAAACGTTA