Insertion junction: CLIP2.056426_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056426
Chromosome:chromosome 6
Location:3806637
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278175 (1 of 1) K14793 - ribosomal RNA-processing protein 9 (RRP9) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGCTACCGTCGGTACAGTAACAGCGCGCGAACGACGCACCAATGCCT
Internal bar code:GGGCGTCTCACGGGTCGACCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGAGATGGGGAAGGGAG
Suggested primer 2:CGCAGAAGGAGGATGCAAGA