Insertion junction: CLIP2.056434_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056434
Chromosome:chromosome 11
Location:559208
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g467603 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGACCAAATTACCGTTTTGTAACCCTCGAACCTGTGCAGGCTGCGAGC
Internal bar code:TAAAAAATTTAGGCTTGGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:206
LEAP-Seq percent confirming:43.2099
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAAGGTGGCCTGCTGGTC
Suggested primer 2:TTCGGGAAAATGGAGTCCGG