Insertion junction: CLIP2.056437_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056437
Chromosome:chromosome 6
Location:3548215
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g278123 VPS39 (1 of 781) IPR000104 - Antifreeze protein, type I; Subunit of VPS-C complex CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGTTCTGGATCGAGCCACCAGATCCGCGCCCGTCGAATCCAGATCCG
Internal bar code:CGAATTTGCAAGTTCCTCCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:697
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGCAGCATGAGGAGCT
Suggested primer 2:CTGCACAGTGCTGCCATTTT